April 20, 2016
| Feature | Nodule (BR) | Endo (NL) |
|---|---|---|
| Platform | MiSeq | MiSeq + HiSeq |
| Read length | 300 | 300 |
| Samples | 18 | 10 |
| Raw | 8.32 Gbp | 191.6 Gbp |
| QC | 4.16 Gbp | 47.2 Gbp |
| Gbp sample | 0.23 | 4.72 |
| Feature | Nodule | Endo |
|---|---|---|
| assembler | megahit | SPAdes |
| # contigs | 74,507 | 1,627,767 |
| % mapped | 99.65 | 98.73 |
| properly paired | 78.16 | 88.20 |
| N50 | 10,631 | 1,652 |
| Bin Id | Marker Lineage | Completeness | Contamination | Length (Mbp) | # Contigs |
|---|---|---|---|---|---|
| bin.3 | f__Paenibacillaceae | 99.85 | 0.02 | 6.4 | 71 |
| bin.8 | o__Actinomycetales | 99.81 | 0 | 3.3 | 57 |
| bin.7 | f__Moraxellaceae | 99.51 | 0.82 | 2.9 | 61 |
| bin.9 | f__Moraxellaceae | 99.45 | 0.14 | 2.9 | 72 |
| bin.4 | g__Burkholderia | 98.46 | 0.57 | 7.4 | 140 |
| bin.10 | o__Bacillales | 97.80 | 1.34 | 4.9 | 139 |